Program

Week Wed. 05 Thu. 06 Fri. 07 List

	Wed. 05	Thu. 06	Fri. 07
09:00 10:00 11:00 12:00 13:00 14:00 15:00 16:00 17:00 18:00 19:00 20:00 21:00 22:00	Lunch and Registration 12:30 - 14:15 (1h45) Lunch and Registration - Welcome and opening remarks 14:15 - 14:30 (15min) Welcome and opening remarks - Session 1 14:30 - 15:50 (1h20) Session 1 › Molecular and cellular basis for host chromatin invasion by retroviral genomes - Vincent Parissi, Laboratoire de Microbiologie Fondamentale et Pathogénicité 14:30-15:10 (40min) › Atypical landscape of transposable elements in the large genome of Aedes aegypti - Josquin Daron, Institut Pasteur, Université Paris Cité, CNRS UMR2000, Insect-Virus Interactions Unit, Paris, France 15:10-15:30 (20min) › Functional consequences of disrupting the epigenetic targeting of transposable elements in Arabidopsis thaliana - Mounia El Messaoudi, Institut de Biologie de l'École Normale Supérieure 15:30-15:50 (20min) Coffee break 15:50 - 16:30 (40min) Coffee break Session 2 16:30 - 17:30 (1h) Session 2 › Studying the population dynamics of transposable elements: new avenues for research. - Yann Bourgeois, IRD, Montpellier 16:30-16:50 (20min) › Function and conservation of Drosophila paralogs in the light of their mobilome neighborhood - Emmanuelle Lerat, Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 16:50-17:10 (20min) › A first step towards the characterization of endogenous retroviruses' evolutionary history and impact on small ruminant genomes - Marie Verneret, Infections Virales et Pathologie Comparée - UMR 754, Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 17:10-17:30 (20min) Poster Session Wine and Cheese 18:30 - 20:30 (2h) Poster Session Wine and Cheese › "P elements in Drosophila willistoni group species”. - Stéphane Ronsseray, IBPS - SU - CNRS 18:30-20:30 (2h) › An LTR-retrotransposon insertion associated with longer grains in indica rice - Noemia Morales, Centre for Research in Agricultural Genomics 18:30-20:30 (2h) › Analyse comparative de l'expression des éléments transposables L1HS par le biais des kmers - Camelia Sennaoui, IRMB U1183 - Nicolas Gilbert, IRMB U1183 - Anthony Boureux, IRMB U1183 18:30-20:30 (2h) › Cell response to retroviral infection Role of the BRCA1/1 pathway on the regulation of non-integrated and integrated viral DNA - Delphine Lapaillerie, Microbiologie Fondamentale et Pathogénicité - Vincent Parissi, Laboratoire de Microbiologie Fondamentale et Pathogénicité 18:30-20:30 (2h) › Contribution of variable TE content on phenotype and plasticity in Drosophila melanogaster - Anaïs Larue, Biologie Fonctionnelle, Insectes et Interactions, Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 18:30-20:30 (2h) › Deciphering the mechanism underlying the non-canonical integration site selection of the Ty1 LTR-retrotransposon of S. cerevisiae - Beatrice Capuzzi, Institut de Recherche Saint-Louis - Hématologie Immunologie Oncologie (Département de recherche de l'UFR de médecine ; ex- Institut Universitaire Hématologie-IUH) 18:30-20:30 (2h) › Detection of copy number alteration signal from plasma DNA LINE-1 targeted bisulfite sequencing : towards a tumor burden marker - Klaus VON GRAFENSTEIN, Institut de recherche en santé, environnement et travail 18:30-20:30 (2h) › DupFinder: a powerful and accurate Nextflow pipeline to detect gene duplications from whole genome sequencing data - Assane Mbodj, IRD 18:30-20:30 (2h) › Identifying LTR-retrotransposon RNA-protein interactions using Comprehensive Identification of RNA-binding proteins (ChIRP-MS) in S. cerevisiae - Hélène BONNET, Institut de Recherche Saint-Louis - Hématologie Immunologie Oncologie (Département de recherche de l'UFR de médecine ; ex- Institut Universitaire Hématologie-IUH) 18:30-20:30 (2h) › Implementation of pangenome graphs to study rice transposon dynamics - Svitlana Sushko, Centre for Research in Agricultural Genomics CSIC-IRTA-UAB-UB, Campus UAB, Edifici CRAG, Bellaterra, Barcelona 08193, Spain 18:30-20:30 (2h) › Mode, tempo, and functional consequences of transposable element mobilization in selfing and outcrossing Arabidopsis lyrata populations - Louna De Oliveira, Institut de biologie de l'ENS Paris 18:30-20:30 (2h) › Nanopore targeted sequencing to study transposition and DNA methylation profiles of mobile elements in Arabidopsis thaliana. - Matteo Barois, Institut de biologie de l'ENS Paris 18:30-20:30 (2h) › Using pangenomes to elucidate the impact of TEs in the polyploidization and domestication of cotton - Lucia Campos Dominguez, Centre for Research in Agricultural Genomics 18:30-20:30 (2h)	Session 3 9:00 - 10:00 (1h) Session 3 › Chemical screening to identify inhibitors of human LINE-1 endonuclease activity in cancer and aging - Aurélien Doucet, Institut de Recherche sur le Cancer et le Vieillissement 09:40-10:00 (20min) Coffee break 10:00 - 10:50 (50min) Coffee break Session 4 10:50 - 12:10 (1h20) Session 4 › Plant mobile domain proteins ensure Microrchidia 1 expression to fulfill transposon silencing - Guillaume Moissiard, Laboratoire Génome et développement des plantes UMR5096 10:50-11:10 (20min) › Role of transposable elements in a parasitoid wasp ongoing speciation - Camille Heisserer, Institut de recherche sur la biologie de l'insecte UMR7261 11:10-11:30 (20min) › Is the siRNA pathway involved in somatic regulation of transposable elements in the mosquito Aedes aegypti? - Alexander Bergman, Interactions Virus-Insectes - Insect-Virus Interactions 11:30-11:50 (20min) › REPET novelties : a versatile and modular package - johann confais, Université Paris-Saclay, INRAE, URGI, 78026, Versailles, France, Université Paris-Saclay, INRAE, BioinfOmics, Plant bioinformatics facility, 78026, Versailles, France 11:50-12:10 (20min) Lunch 12:10 - 14:00 (1h50) Lunch Session 5 14:00 - 15:20 (1h20) Session 5 › Impact of viral infections on transposable element transcripts and small RNA abundances in Aedes aegypti - Chloé Garambois, Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 14:00-14:20 (20min) › HELA: A fast and accurate tool for Helitron annotation - Zhen Li, Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198 Gif-sur-Yvette, France 14:20-14:40 (20min) › Transposable element mobility as a motor of genomic variation in Beech trees ? - Abirami Soundiramourtty, Laboratoire Génome et développement des plantes 14:40-15:00 (20min) › Study of the interactome and expression of the ORF1p protein encoded by LINE-1 retrotransposons in the brain under aging and pathophysiological conditions. - Tom BONNIFET, CIRB - Collège de France 15:00-15:20 (20min) Coffee break 15:20 - 16:00 (40min) Coffee break Round Table - Vincent Colot 16:00 - 17:30 (1h30) Round Table - Vincent Colot Gala dinner on the beach 19:00 - 22:30 (3h30) Gala dinner on the beach Restaurant Pescadoras Route De La Plage Nord Camping Marisol, 66440 Torreilles Plage France	Session 6 9:00 - 10:20 (1h20) Session 6 › Transposon insertions associate with transcriptional variability linked to rice domestication and breeding - Raúl CASTANERA, Centre for Research in Agricultural Genomics CSIC-IRTA-UAB-UB, Campus UAB, Edifici CRAG, Bellaterra, Barcelona 08193, Spain 09:00-09:40 (40min) › Transposable elements as an evolutionary driving force in cactophilic Drosophila species - Daniel Siqueira de Oliveira, Université Claude Bernard Lyon 1, Universidade Estadual Paulista Júlio de Mesquita Filho = São Paulo State University 10:00-10:20 (20min) Coffee break 10:30 - 10:50 (20min) Coffee break Session 7 10:50 - 11:50 (1h) Session 7 › Decoding Human Endogenous Retrovirus Landscape in liver metastatic colorectal cancers: Implications for Diagnosis and Prognosis - Julien Viot, ONCOLOGY BESANCON INSERM 1098, Autoimmunité, Transplantation, et Inflammation (UMR 1098) 11:10-11:30 (20min) › Characterization of Transposable Elements in Pangenomes - Somia SAIDI, Université Paris-Saclay, INRAE, URGI, 78026 Versailles, France., Université Paris-Saclay, INRAE, BioinfOmics, Plant bioinformatics facility, 78026, Versailles, France. 11:30-11:50 (20min)

Online user: 2

Privacy