CNET 2023 : 24th National Congress on Transposable Elements 2023

5-7 Jul 2023 Perpignan city center - Campus Mailly (France)

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Program

Week Wed. 05 Thu. 06 Fri. 07 List

Wednesday, July 5, 2023 ›

12:00

13:00

14:00

15:00

16:00

17:00

18:00

19:00

20:00

›12:30 (1h45)

Lunch and Registration

12:30 - 14:15 (1h45)

Lunch and Registration

›14:15 (15min)

Welcome and opening remarks

14:15 - 14:30 (15min)

Welcome and opening remarks

›14:30 (1h20)

Session 1

14:30 - 15:50 (1h20)

Session 1

› Molecular and cellular basis for host chromatin invasion by retroviral genomes - Vincent Parissi, Laboratoire de Microbiologie Fondamentale et Pathogénicité 14:30-15:10 (40min)

› Atypical landscape of transposable elements in the large genome of Aedes aegypti - Josquin Daron, Institut Pasteur, Université Paris Cité, CNRS UMR2000, Insect-Virus Interactions Unit, Paris, France 15:10-15:30 (20min)

› Functional consequences of disrupting the epigenetic targeting of transposable elements in Arabidopsis thaliana - Mounia El Messaoudi, Institut de Biologie de l'École Normale Supérieure 15:30-15:50 (20min)

›15:50 (40min)

Coffee break

15:50 - 16:30 (40min)

Coffee break

›16:30 (1h)

Session 2

16:30 - 17:30 (1h)

Session 2

› Studying the population dynamics of transposable elements: new avenues for research. - Yann Bourgeois, IRD, Montpellier 16:30-16:50 (20min)

› Function and conservation of Drosophila paralogs in the light of their mobilome neighborhood - Emmanuelle Lerat, Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 16:50-17:10 (20min)

› A first step towards the characterization of endogenous retroviruses' evolutionary history and impact on small ruminant genomes - Marie Verneret, Infections Virales et Pathologie Comparée - UMR 754, Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 17:10-17:30 (20min)

›18:30 (2h)

Poster Session Wine and Cheese

18:30 - 20:30 (2h)

Poster Session Wine and Cheese

› "P elements in Drosophila willistoni group species”. - Stéphane Ronsseray, IBPS - SU - CNRS 18:30-20:30 (2h)

› An LTR-retrotransposon insertion associated with longer grains in indica rice - Noemia Morales, Centre for Research in Agricultural Genomics 18:30-20:30 (2h)

› Analyse comparative de l'expression des éléments transposables L1HS par le biais des kmers - Camelia Sennaoui, IRMB U1183 - Nicolas Gilbert, IRMB U1183 - Anthony Boureux, IRMB U1183 18:30-20:30 (2h)

› Cell response to retroviral infection Role of the BRCA1/1 pathway on the regulation of non-integrated and integrated viral DNA - Delphine Lapaillerie, Microbiologie Fondamentale et Pathogénicité - Vincent Parissi, Laboratoire de Microbiologie Fondamentale et Pathogénicité 18:30-20:30 (2h)

› Contribution of variable TE content on phenotype and plasticity in Drosophila melanogaster - Anaïs Larue, Biologie Fonctionnelle, Insectes et Interactions, Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 18:30-20:30 (2h)

› Deciphering the mechanism underlying the non-canonical integration site selection of the Ty1 LTR-retrotransposon of S. cerevisiae - Beatrice Capuzzi, Institut de Recherche Saint-Louis - Hématologie Immunologie Oncologie (Département de recherche de l'UFR de médecine ; ex- Institut Universitaire Hématologie-IUH) 18:30-20:30 (2h)

› Detection of copy number alteration signal from plasma DNA LINE-1 targeted bisulfite sequencing : towards a tumor burden marker - Klaus VON GRAFENSTEIN, Institut de recherche en santé, environnement et travail 18:30-20:30 (2h)

› DupFinder: a powerful and accurate Nextflow pipeline to detect gene duplications from whole genome sequencing data - Assane Mbodj, IRD 18:30-20:30 (2h)

› Identifying LTR-retrotransposon RNA-protein interactions using Comprehensive Identification of RNA-binding proteins (ChIRP-MS) in S. cerevisiae - Hélène BONNET, Institut de Recherche Saint-Louis - Hématologie Immunologie Oncologie (Département de recherche de l'UFR de médecine ; ex- Institut Universitaire Hématologie-IUH) 18:30-20:30 (2h)

› Implementation of pangenome graphs to study rice transposon dynamics - Svitlana Sushko, Centre for Research in Agricultural Genomics CSIC-IRTA-UAB-UB, Campus UAB, Edifici CRAG, Bellaterra, Barcelona 08193, Spain 18:30-20:30 (2h)

› Mode, tempo, and functional consequences of transposable element mobilization in selfing and outcrossing Arabidopsis lyrata populations - Louna De Oliveira, Institut de biologie de l'ENS Paris 18:30-20:30 (2h)

› Nanopore targeted sequencing to study transposition and DNA methylation profiles of mobile elements in Arabidopsis thaliana. - Matteo Barois, Institut de biologie de l'ENS Paris 18:30-20:30 (2h)

› Using pangenomes to elucidate the impact of TEs in the polyploidization and domestication of cotton - Lucia Campos Dominguez, Centre for Research in Agricultural Genomics 18:30-20:30 (2h)

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