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12:30 - 14:15
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Lunch and Registration - - |
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14:15 - 14:30
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Welcome and opening remarks - - |
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14:30 - 15:50
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Session 1 |
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14:30 - 15:10 |
› Molecular and cellular basis for host chromatin invasion by retroviral genomes - Vincent Parissi, Laboratoire de Microbiologie Fondamentale et Pathogénicité |
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15:10 - 15:30 |
› Atypical landscape of transposable elements in the large genome of Aedes aegypti - Josquin Daron, Institut Pasteur, Université Paris Cité, CNRS UMR2000, Insect-Virus Interactions Unit, Paris, France |
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15:30 - 15:50 |
› Functional consequences of disrupting the epigenetic targeting of transposable elements in Arabidopsis thaliana - Mounia El Messaoudi, Institut de Biologie de l'École Normale Supérieure |
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15:50 - 16:30
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Coffee break |
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16:30 - 17:30
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Session 2 |
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16:30 - 16:50 |
› Studying the population dynamics of transposable elements: new avenues for research. - Yann Bourgeois, IRD, Montpellier |
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16:50 - 17:10 |
› Function and conservation of Drosophila paralogs in the light of their mobilome neighborhood - Emmanuelle Lerat, Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 |
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17:10 - 17:30 |
› A first step towards the characterization of endogenous retroviruses' evolutionary history and impact on small ruminant genomes - Marie Verneret, Infections Virales et Pathologie Comparée - UMR 754, Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 |
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18:30 - 20:30
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Poster Session Wine and Cheese |
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18:30 - 20:30 |
› An LTR-retrotransposon insertion associated with longer grains in indica rice - Noemia Morales, Centre for Research in Agricultural Genomics |
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18:30 - 20:30 |
› Analyse comparative de l'expression des éléments transposables L1HS par le biais des kmers - Camelia Sennaoui, IRMB U1183 - Nicolas Gilbert, IRMB U1183 - Anthony Boureux, IRMB U1183 |
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18:30 - 20:30 |
› Cell response to retroviral infection Role of the BRCA1/1 pathway on the regulation of non-integrated and integrated viral DNA - Delphine Lapaillerie, Microbiologie Fondamentale et Pathogénicité - Vincent Parissi, Laboratoire de Microbiologie Fondamentale et Pathogénicité |
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18:30 - 20:30 |
› Deciphering the mechanism underlying the non-canonical integration site selection of the Ty1 LTR-retrotransposon of S. cerevisiae - Beatrice Capuzzi, Institut de Recherche Saint-Louis - Hématologie Immunologie Oncologie (Département de recherche de l'UFR de médecine ; ex- Institut Universitaire Hématologie-IUH) |
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18:30 - 20:30 |
› Detection of copy number alteration signal from plasma DNA LINE-1 targeted bisulfite sequencing : towards a tumor burden marker - Klaus VON GRAFENSTEIN, Institut de recherche en santé, environnement et travail |
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18:30 - 20:30 |
› Identifying LTR-retrotransposon RNA-protein interactions using Comprehensive Identification of RNA-binding proteins (ChIRP-MS) in S. cerevisiae - Hélène BONNET, Institut de Recherche Saint-Louis - Hématologie Immunologie Oncologie (Département de recherche de l'UFR de médecine ; ex- Institut Universitaire Hématologie-IUH) |
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18:30 - 20:30 |
› Implementation of pangenome graphs to study rice transposon dynamics - Svitlana Sushko, Centre for Research in Agricultural Genomics CSIC-IRTA-UAB-UB, Campus UAB, Edifici CRAG, Bellaterra, Barcelona 08193, Spain |
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18:30 - 20:30 |
› Nanopore targeted sequencing to study transposition and DNA methylation profiles of mobile elements in Arabidopsis thaliana. - Matteo Barois, Institut de biologie de l'ENS Paris |
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18:30 - 20:30 |
› Mode, tempo, and functional consequences of transposable element mobilization in selfing and outcrossing Arabidopsis lyrata populations - Louna De Oliveira, Institut de biologie de l'ENS Paris |
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18:30 - 20:30 |
› Using pangenomes to elucidate the impact of TEs in the polyploidization and domestication of cotton - Lucia Campos Dominguez, Centre for Research in Agricultural Genomics |
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18:30 - 20:30 |
› "P elements in Drosophila willistoni group species”. - Stéphane Ronsseray, IBPS - SU - CNRS |
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18:30 - 20:30 |
› Contribution of variable TE content on phenotype and plasticity in Drosophila melanogaster - Anaïs Larue, Biologie Fonctionnelle, Insectes et Interactions, Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 |
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18:30 - 20:30 |
› DupFinder: a powerful and accurate Nextflow pipeline to detect gene duplications from whole genome sequencing data - Assane Mbodj, IRD |
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